List of data formats

Click to have more information (including implementing databases, connectivity, license, etc.) in Biosharing

 List of vocabularies and ontologies

Click to have more information (including implementing databases, connectivity, license, etc.) in Biosharing

  • AGROVOC
  • CAB Thesaurus (CABT)
  • Cell Ontology (CL) – [To Biosharing]
  • Chemical Entities of Biological Interest (ChEBI) – [To Biosharing]
  • Crop Ontology (CO) – [Recommended for Phenotypes]
  • Environment Ontology (ENVO) – [To Biosharing]
  • Experimental Factor Ontology (EFO) – [To Biosharing]
  • Feature Annotation Location Description Ontology (FALDO)
  • NAL Thesaurus (NALT)
  • Phenotype And Trait Ontology (PATO) – [To Biosharing]
  • Plant Experimental Conditions Ontology (Plant Environment Ontology, EO, may be changing to PECO) – [Recommended for Gene Expression] – [To Biosharing]
  • Plant Ontology (PO) – [Recommended for Gene Expression] – [To Biosharing]
  • Plant Trait Ontology (TO) –  [To Biosharing]
  • Population and Community Ontology (PCO) –  [To Biosharing]
  • Protein Ontology (PRO) – [To Biosharing]
  • Sequence Ontology (SO)
  • Variation Ontology (VariO)
  • Wheat Ontology INRA (Wheat_Ontology)
  • Wheat Plant Anatomy and Development Ontology and Crop Research ontology, part of CO (CO_121 and CO_715)
  • Wheat trait ontology: Embedded in Crop Ontology (CO_321) –  [To Biosharing]
  • WheatPhenotype (phenotypes and traits in Wheat)