{"id":7119,"date":"2026-10-19T09:31:42","date_gmt":"2026-10-19T07:31:42","guid":{"rendered":"https:\/\/ist.blogs.inrae.fr\/afs\/?p=7119"},"modified":"2026-10-14T09:48:21","modified_gmt":"2026-10-14T07:48:21","slug":"optgerm-a-comprehensive-database-of-within-and-among-species-germination-and-early-seedling-development-for-six-european-tree-species","status":"publish","type":"post","link":"https:\/\/ist.blogs.inrae.fr\/afs\/2026\/10\/19\/optgerm-a-comprehensive-database-of-within-and-among-species-germination-and-early-seedling-development-for-six-european-tree-species\/","title":{"rendered":"OptGERM: a comprehensive database of within and among species germination and early seedling development for six European tree species"},"content":{"rendered":"<script type='text\/javascript' src='https:\/\/d1bxh8uas1mnw7.cloudfront.net\/assets\/embed.js'><\/script><p><b><a href=\"https:\/\/ist.blogs.inrae.fr\/afs\/wp-content\/uploads\/sites\/5\/2026\/10\/13595_2026_1368_Fig1.png\"><img loading=\"lazy\" decoding=\"async\" class=\"size-medium wp-image-7120 alignright\" src=\"https:\/\/ist.blogs.inrae.fr\/afs\/wp-content\/uploads\/sites\/5\/2026\/10\/13595_2026_1368_Fig1-300x256.png\" alt=\"\" width=\"300\" height=\"256\" srcset=\"https:\/\/ist.blogs.inrae.fr\/afs\/wp-content\/uploads\/sites\/5\/2026\/10\/13595_2026_1368_Fig1-300x256.png 300w, https:\/\/ist.blogs.inrae.fr\/afs\/wp-content\/uploads\/sites\/5\/2026\/10\/13595_2026_1368_Fig1-768x654.png 768w, https:\/\/ist.blogs.inrae.fr\/afs\/wp-content\/uploads\/sites\/5\/2026\/10\/13595_2026_1368_Fig1-640x545.png 640w, https:\/\/ist.blogs.inrae.fr\/afs\/wp-content\/uploads\/sites\/5\/2026\/10\/13595_2026_1368_Fig1.png 845w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><\/b><strong>Key message<\/strong><\/p>\n<p align=\"justify\">This dataset reports translocation experiments on 15,774 seeds from 43 populations of\u00a0<i>Abies alba<\/i>\u00a0Mill.,\u00a0<i>Acer pseudoplatanus<\/i>\u00a0L.,\u00a0<i>Fagus sylvatica<\/i>\u00a0L.,\u00a0<i>Quercus petraea<\/i>\u00a0(Matt.) Liebl.,\u00a0<i>Quercus pubescens<\/i>\u00a0Willd., and\u00a0<i>Quercus suber<\/i>\u00a0L. It informs ecological and evolutionary processes in early tree stages. Dataset access at\u00a0<a href=\"https:\/\/doi.org\/10.5281\/zenodo.22043408\">https:\/\/doi.org\/10.5281\/zenodo.22043408<\/a>\u00a0and metadata accessible at\u00a0<a href=\"https:\/\/metadata-afs.nancy.inra.fr\/geonetwork\/srv\/fre\/catalog.search#\/metadata\/15a31f1d-6658-4264-abed-67b5664b9c12\">https:\/\/metadata-afs.nancy.inra.fr\/geonetwork\/srv\/fre\/catalog.search#\/metadata\/15a31f1d-6658-4264-abed-67b5664b9c12<\/a>.<\/p>\n<section class=\"c-article-recommendations\" aria-labelledby=\"inline-recommendations\" data-title=\"Inline Recommendations\" data-track-component=\"inline-recommendations\"><\/section>\n<section class=\"c-article-recommendations\" aria-labelledby=\"inline-recommendations\" data-title=\"Inline Recommendations\" data-track-component=\"inline-recommendations\"><\/section>\n<p><strong>Keywords<br \/>\n<\/strong>Silver fir; Sycamore; European beech; Sessile oak; Pubescent oak; Cork oak; Translocation experiment; Warming; Plasticity; Adaptation<\/p>\n<div class='altmetric-embed' data-badge-type='donut' data-doi='10.1186\/s13595-026-01368-0'  style='float: right; ' ><\/div>\n<p><strong>Publication<br \/>\n<\/strong>Benito Garz\u00f3n, M., Agro, M., Vicente, E.\u00a0<i>et al.<\/i>\u00a0OptGERM: a comprehensive database of within and among species germination and early seedling development for six European tree species.\u00a0<i>Annals of Forest Science<\/i>\u00a0<b>83<\/b>, 47 (2026). <a href=\"https:\/\/doi.org\/10.1186\/s13595-026-01368-0\">https:\/\/doi.org\/10.1186\/s13595-026-01368-0<\/a><\/p>\n<p><strong>Data availability<br \/>\n<\/strong>The Zenodo (<a href=\"https:\/\/doi.org\/10.5281\/zenodo.22043408\">https:\/\/doi.org\/10.5281\/zenodo.22043408<\/a>) repository contains the entire database as two csv files (OptGERM_Traits.csv and OptGERM_Provenances.csv) and their corresponding OptGERM_Metadata.doc file. The R scripts used to plot Figs.\u00a0<a href=\"https:\/\/link.springer.com\/article\/10.1186\/s13595-026-01368-0#Fig1\" data-track=\"click\" data-track-label=\"link\" data-track-action=\"figure anchor\">1<\/a>,\u00a0<a href=\"https:\/\/link.springer.com\/article\/10.1186\/s13595-026-01368-0#Fig2\" data-track=\"click\" data-track-label=\"link\" data-track-action=\"figure anchor\">2<\/a>\u00a0and\u00a0<a href=\"https:\/\/link.springer.com\/article\/10.1186\/s13595-026-01368-0#Fig3\" data-track=\"click\" data-track-label=\"link\" data-track-action=\"figure anchor\">3<\/a>\u00a0are also included in the Zenodo repository.<\/p>\n<p><strong>Handling editor<br \/>\n<\/strong>Erwin Dreyer<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Key message This dataset reports translocation experiments on 15,774 seeds from 43 populations of\u00a0Abies alba\u00a0Mill.,\u00a0Acer pseudoplatanus\u00a0L.,\u00a0Fagus sylvatica\u00a0L.,\u00a0Quercus petraea\u00a0(Matt.) Liebl.,\u00a0Quercus pubescens\u00a0Willd., and\u00a0Quercus suber\u00a0L. It informs ecological and evolutionary processes in early tree stages. Dataset access at\u00a0https:\/\/doi.org\/10.5281\/zenodo.22043408\u00a0and metadata accessible at\u00a0https:\/\/metadata-afs.nancy.inra.fr\/geonetwork\/srv\/fre\/catalog.search#\/metadata\/15a31f1d-6658-4264-abed-67b5664b9c12. Keywords Silver fir; Sycamore; European beech; Sessile oak; Pubescent oak; Cork oak; Translocation experiment; Warming; Plasticity; Adaptation [&hellip;]<\/p>\n","protected":false},"author":240,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[14,100,1,109],"tags":[],"class_list":["post-7119","post","type-post","status-publish","format-standard","hentry","category-article-type","category-data-paper","category-non-classe","category-open-access","cat-14-id","cat-100-id","cat-1-id","cat-109-id"],"_links":{"self":[{"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/posts\/7119","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/users\/240"}],"replies":[{"embeddable":true,"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/comments?post=7119"}],"version-history":[{"count":1,"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/posts\/7119\/revisions"}],"predecessor-version":[{"id":7121,"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/posts\/7119\/revisions\/7121"}],"wp:attachment":[{"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/media?parent=7119"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/categories?post=7119"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/tags?post=7119"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}