{"id":3307,"date":"2019-03-27T09:00:53","date_gmt":"2019-03-27T08:00:53","guid":{"rendered":"https:\/\/ist.blogs.inra.fr\/afs\/?p=3307"},"modified":"2019-03-21T10:27:08","modified_gmt":"2019-03-21T09:27:08","slug":"demographic-history-and-spatial-genetic-structure-in-a-remnant-population-of-the-subtropical-tree-anadenanthera-colubrina-var-cebil-griseb-altschul-fabaceae","status":"publish","type":"post","link":"https:\/\/ist.blogs.inrae.fr\/afs\/2019\/03\/27\/demographic-history-and-spatial-genetic-structure-in-a-remnant-population-of-the-subtropical-tree-anadenanthera-colubrina-var-cebil-griseb-altschul-fabaceae\/","title":{"rendered":"Demographic history and spatial genetic structure in a remnant population of the subtropical tree Anadenanthera colubrina var. cebil (Griseb.) Altschul (Fabaceae)"},"content":{"rendered":"<script type='text\/javascript' src='https:\/\/d1bxh8uas1mnw7.cloudfront.net\/assets\/embed.js'><\/script><p align=\"justify\"><strong><a href=\"https:\/\/ist.blogs.inra.fr\/afs\/wp-content\/uploads\/sites\/5\/2019\/03\/Goncalves-et-al.png\"><img loading=\"lazy\" decoding=\"async\" class=\"size-medium wp-image-3308 alignleft\" src=\"https:\/\/ist.blogs.inra.fr\/afs\/wp-content\/uploads\/sites\/5\/2019\/03\/Goncalves-et-al-300x229.png\" alt=\"\" width=\"300\" height=\"229\" srcset=\"https:\/\/ist.blogs.inrae.fr\/afs\/wp-content\/uploads\/sites\/5\/2019\/03\/Goncalves-et-al-300x229.png 300w, https:\/\/ist.blogs.inrae.fr\/afs\/wp-content\/uploads\/sites\/5\/2019\/03\/Goncalves-et-al-768x587.png 768w, https:\/\/ist.blogs.inrae.fr\/afs\/wp-content\/uploads\/sites\/5\/2019\/03\/Goncalves-et-al-640x490.png 640w, https:\/\/ist.blogs.inrae.fr\/afs\/wp-content\/uploads\/sites\/5\/2019\/03\/Goncalves-et-al.png 1004w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><\/strong>A remnant population of <em>Anadenanthera colubrina<\/em> var. <em>cebil<\/em> in Northern Argentina showed a mixed mating system, high genetic diversity, and moderate spatial genetic structure, which was stronger in saplings than in adults. Demographic history analyses revealed an ancient population expansion. Despite high genetic diversity, high inbreeding suggests caution in the use of this stand as seed source.<br \/>\n<strong>Context<\/strong> Information on fine-scale spatial genetic structure (FSGS) and demographic history is essential to determine which mechanisms are responsible for population persistence and evolution. This is particularly important in fragmented biomes, such as the seasonally dry tropical forests.<br \/>\n<strong>Aims<\/strong> To assess the level of genetic diversity and population genetic structure in a remnant population of <em>A. colubrina<\/em> var. <em>cebil<\/em>, and to evaluate the influence of historical and contemporary environmental change on the genetic constitution of this population.<br \/>\n<strong>Methods<\/strong> Eight microsatellites were typed in 60 adults and 59 saplings. The existence of (non-spatial) genetic clusters was evaluated using STRUCTURE and PCAs. FSGS was evaluated by kinship analyses and sPCA. MCMCglmm models were used to provide insights into factors underlying FSGS. Demographic history was studied using bottleneck statistics and approximate Bayesian computation.<br \/>\n<strong>Results<\/strong> We found high levels of genetic diversity and high inbreeding. Genetic structure was stronger in saplings than in adult trees, probably due to assortative mating, and was not explained by altitude or DBH. Demographic analyses suggested an ancient population expansion.<br \/>\n<strong>Conclusion<\/strong> Patterns of inbreeding and relatedness suggest a mixed mating system. High genetic diversity and moderate genetic structure suggest long-term population viability. High inbreeding suggests caution when using this stand as a source of material for reforestation.<\/p>\n<p><strong>Keywords<\/strong><br \/>\nParanaense biogeographic province, Fine-scale spatial genetic structure, Demographic modelling, Genetic diversity, Inbreeding, Microsatellites<\/p>\n<div class='altmetric-embed' data-badge-type='donut' data-doi='10.1007\/s13595-019-0797-z'  style='float: right; ' ><\/div>\n<p><strong>Publication<\/strong><br \/>\nGoncalves, A.L., Garc\u00eda, M.V., Heuertz, M. et al. Annals of Forest Science (2019) 76: 18. <a href=\"https:\/\/doi.org\/10.1007\/s13595-019-0797-z\">https:\/\/doi.org\/10.1007\/s13595-019-0797-z<\/a><\/p>\n<p>For the read-only version of the full text: <a href=\"https:\/\/rdcu.be\/brXWF\">https:\/\/rdcu.be\/brXWF<\/a><\/p>\n<p align=\"justify\"><strong>Data availability<\/strong><br \/>\nGenetic and population data are available from the FIGSHARE repository (Goncalves et al. 2018). Goncalves et al. (2018). Data from &#8220;Demographic history and spatial genetic structure in a remnant population of the subtropical tree <em>Anadenanthera colubrina<\/em> var. <em>cebil<\/em> (Griseb.) Altschul (Fabaceae)&#8221;. V1. figshare. [Dataset].<br \/>\n<a href=\"https:\/\/doi.org\/10.6084\/m9.figshare.7488650.v1\">https:\/\/doi.org\/10.6084\/m9.figshare.7488650.v1<\/a>.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>A remnant population of Anadenanthera colubrina var. cebil in Northern Argentina showed a mixed mating system, high genetic diversity, and moderate spatial genetic structure, which was stronger in saplings than in adults. Demographic history analyses revealed an ancient population expansion. Despite high genetic diversity, high inbreeding suggests caution in the use of this stand as [&hellip;]<\/p>\n","protected":false},"author":106,"featured_media":3308,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[14,110,15],"tags":[],"class_list":["post-3307","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-article-type","category-data-in-repository","category-research-paper","cat-14-id","cat-110-id","cat-15-id","has_thumb"],"_links":{"self":[{"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/posts\/3307","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/users\/106"}],"replies":[{"embeddable":true,"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/comments?post=3307"}],"version-history":[{"count":0,"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/posts\/3307\/revisions"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/media\/3308"}],"wp:attachment":[{"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/media?parent=3307"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/categories?post=3307"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/ist.blogs.inrae.fr\/afs\/wp-json\/wp\/v2\/tags?post=3307"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}